GetDNA module¶
This module is used for downloading the DNA sequence from ncbi web. You can only
need input a DNA ID.
Authors: Zhijiang Yao and Dongsheng Cao.
Date: 2016.11.04
Email: gadsby@163.com
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GetDNA.
GetDNAFromUniGene
(SeqID='')[source]¶ This module is used for downloading the DNA sequence from ncbi web. You can only
need input a DNA ID.
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GetDNA.
IsFasta
(seq)[source]¶ Judge the Seq object is in FASTA format. Two situation: 1. No seq name. 2. Seq name is illegal. 3. No sequence.
Parameters: seq – Seq object.
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GetDNA.
IsUnderAlphabet
(s, alphabet)[source]¶ Judge the string is within the scope of the alphabet or not.
Parameters: - s – The string.
- alphabet – alphabet.